C9orf72, chr9:27546544-27573864 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3849942 chr9:27543281 C9orf72 [-3263bp] All: C 20,662 14 T vs. C 0.217 (T) 0.058 (T) 1.20 (1.14-1.26) 73 (54-84) 3.61e-12
Meta_image?name=rs3849942

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3849942 chr9:27543281 C9orf72 [-3263bp] All: C 20,662 14 T vs. C 0.217 (T) 0.058 (T) 1.20 (1.14-1.26) 73 (54-84) 3.61e-12
rs774359 chr9:27561049 C9orf72 All: C 15,850 9 C vs. T 0.25 (C) 0.067 (C) 1.25 (1.16-1.34) 72 (46-86) 4.31e-10
rs2814707 chr9:27536397 MOB3B [+6618bp] All: A, C 11,047 9 C vs. T 0.217 (T) 0.042 (T) 0.84 (0.77-0.90) 48 (0-76) 5.47e-06
rs1982915 chr9:27579560 C9orf72 [+5696bp] All: C 7,520 8 A vs. G 0.492 (A) 0.167 (G) 0.92 (0.86-0.98) 39 (0-73) 0.007
rs2282241 chr9:27572255 C9orf72 All: C 7,520 8 A vs. C 0.367 (A) 0.267 (C) 0.92 (0.86-0.98) 0 (0-61) 0.014
rs903603 chr9:27529316 MOB3B All: C 7,520 8 G vs. A 0.483 (G) 0.275 (G) 1.08 (1.02-1.16) 47 (0-76) 0.015
rs702231 chr9:27588730 C9orf72 [+14866bp] All: C 7,520 8 C vs. A 0.192 (C) 0.4 (C) <1 (-) 30 (-) >0.05
rs1977661 chr9:27502985 MOB3B All: C 7,520 8 A vs. C 0.083 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs10757665 chr9:27557919 C9orf72 All: C 7,520 8 C vs. T 0.308 (C) 0.117 (C) 0.94 (0.87-1.01) 34 (0-71) 0.108
rs696826 chr9:27589656 C9orf72 [+15792bp] All: C 7,520 8 A vs. G 0.133 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs3913107 chr9:27623557 C9orf72 [+49693bp] All: C 7,520 8 G vs. A 0.083 (G) 0.0 (G) >1 (-) 38 (-) >0.05
rs10122902 chr9:27556779 C9orf72 All: C 7,520 8 A vs. G 0.183 (A) 0.225 (A) >1 (-) 17 (-) >0.05
rs1948522 chr9:27575784 C9orf72 [+1920bp] All: C 7,520 8 T vs. C 0.217 (T) 0.092 (T) <1 (-) 48 (-) >0.05

Association studies for this region [+]