OPTN, chr10:13141449-13180291 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10796033 chr10:13200057 MCM10 [-3497bp] All: C 7,520 8 C vs. A 0.3 (C) 0.25 (C) 1.13 (1.05-1.22) 17 (0-60) 9.13e-04
Meta_image?name=rs10796033

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10796033 chr10:13200057 MCM10 [-3497bp] All: C 7,520 8 C vs. A 0.3 (C) 0.25 (C) 1.13 (1.05-1.22) 17 (0-60) 9.13e-04
rs10906310 (IVS15-48C>A) chr10:13178697 OPTN All: C 7,520 8 A vs. C 0.275 (A) 0.333 (A) 1.12 (1.04-1.21) 13 (0-55) 0.004
rs6602637 chr10:13214811 MCM10 All: C 7,520 8 A vs. G 0.208 (A) 0.408 (A) >1 (-) 0 (-) >0.05
rs1371534 chr10:13130533 CCDC3 All: C 7,520 8 A vs. G 0.45 (A) 0.242 (G) >1 (-) 26 (-) >0.05
rs609445 chr10:13100998 CCDC3 All: C 7,520 8 C vs. T 0.4 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs525455 chr10:13103284 CCDC3 All: C 7,520 8 G vs. A 0.4 (G) 0.467 (A) >1 (-) 0 (-) >0.05
rs4750306 chr10:13115886 CCDC3 All: C 7,520 8 C vs. T 0.25 (C) 0.267 (C) >1 (-) 0 (-) >0.05
rs10906313 chr10:13193188 MCM10 [-10366bp] All: C 7,520 8 A vs. G 0.258 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs11258183 chr10:13131134 CCDC3 All: C 7,520 8 A vs. G 0.017 (A) 0.283 (A) >1 (-) 0 (-) >0.05
rs825411 chr10:13169373 OPTN All: C 7,520 8 T vs. C 0.475 (A) 0.467 (G) <1 (-) 12 (-) >0.05
rs2244380 (IVS6-5T>C) chr10:13158262 OPTN All: C 7,520 8 C vs. T 0.183 (C) 0.317 (C) 0.97 (0.89-1.05) 0 (-) 0.457
rs1953314 chr10:13135830 CCDC3 All: C 7,520 8 A vs. G 0.083 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs942412 chr10:13226828 MCM10 All: C 7,520 8 A vs. C 0.117 (T) 0.167 (T) >1 (-) 25 (-) >0.05
rs768255 chr10:13210174 MCM10 All: C 7,520 8 T vs. C 0.483 (T) 0.492 (T) >1 (-) 14 (-) >0.05
rs17152780 chr10:13100856 CCDC3 All: C 7,520 8 A vs. G 0.192 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs2095388 chr10:13184044 OPTN [+3753bp] All: C 7,520 8 G vs. A 0.267 (G) 0.217 (G) <1 (-) 0 (-) >0.05
rs1347979 chr10:13097736 CCDC3 All: C 7,520 8 G vs. A 0.292 (C) 0.15 (C) <1 (-) 0 (-) >0.05
rs3765520 chr10:13224885 MCM10 All: C 7,520 8 A vs. C 0.292 (T) 0.45 (T) <1 (-) 0 (-) >0.05
rs11258231 chr10:13221911 MCM10 All: C 7,520 8 C vs. A 0.083 (C) - >1 (-) 0 (-) >0.05
rs10796010 chr10:13108439 CCDC3 All: C 7,520 8 A vs. C 0.425 (A) 0.217 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]