TBC1D5, chr3:17198654-18486309 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10510480 chr3:17868000 TBC1D5 All: C 7,520 8 C vs. T 0.108 (C) 0.45 (C) 1.25 (1.12-1.40) 0 (0-65) 7.33e-05
Meta_image?name=rs10510480

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10510480 chr3:17868000 TBC1D5 All: C 7,520 8 C vs. T 0.108 (C) 0.45 (C) 1.25 (1.12-1.40) 0 (0-65) 7.33e-05
rs13080765 chr3:18211326 TBC1D5 All: C 7,520 8 A vs. G 0.125 (A) 0.075 (A) 0.88 (0.79-0.97) 0 (0-50) 0.011
rs13068830 chr3:18207731 TBC1D5 All: C 7,520 8 G vs. T 0.175 (G) 0.083 (G) 0.89 (0.82-0.98) 0 (0-18) 0.013
rs1475469 chr3:18459926 TBC1D5 All: C 7,520 8 C vs. A 0.15 (C) 0.4 (C) 0.90 (0.83-0.99) 0 (0-54) 0.023
rs6762753 chr3:18465443 TBC1D5 All: C 7,520 8 A vs. G 0.142 (A) 0.3 (A) 0.91 (0.83-0.99) 0 (0-53) 0.037
rs13092967 chr3:18125502 TBC1D5 All: C 7,520 8 A vs. G 0.083 (A) 0.058 (A) 0.89 (0.79-1.00) 6 (0-70) 0.048
rs9821325 chr3:17949228 TBC1D5 All: C 7,520 8 T vs. C 0.158 (T) 0.0 (T) >1 (-) 13 (-) >0.05
rs13079656 chr3:18093080 TBC1D5 All: C 7,520 8 G vs. A 0.117 (G) 0.083 (G) 0.89 (0.80-1.00) 0 (-) 0.052
rs7639295 chr3:18077056 TBC1D5 All: C 7,520 8 T vs. C 0.083 (T) 0.058 (T) >1 (-) 1 (-) >0.05
rs4128294 chr3:18318326 TBC1D5 All: C 7,520 8 A vs. G 0.15 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs7434191 chr3:18385731 TBC1D5 All: C 7,520 8 G vs. T 0.5 (G) 0.292 (T) >1 (-) 0 (-) >0.05
rs13067311 chr3:17957646 TBC1D5 All: C 7,520 8 T vs. C 0.067 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs7433691 chr3:18380443 TBC1D5 All: C 7,520 8 G vs. A 0.133 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs9683201 chr3:18444170 TBC1D5 All: C 7,520 8 C vs. T 0.417 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs6577615 chr3:18148269 TBC1D5 All: C 7,520 8 A vs. G 0.183 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs7432238 chr3:18396324 TBC1D5 All: C 7,520 8 G vs. T 0.058 (G) 0.483 (T) >1 (-) 0 (-) >0.05
rs7627406 chr3:18168802 TBC1D5 All: C 7,520 8 A vs. C 0.058 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs11921478 chr3:18353001 TBC1D5 All: C 7,520 8 G vs. T 0.433 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs10433559 chr3:17765958 TBC1D5 All: C 7,520 8 C vs. T 0.167 (C) 0.475 (C) >1 (-) 0 (-) >0.05
rs1019848 chr3:17906525 TBC1D5 All: C 7,520 8 G vs. A 0.358 (G) 0.1 (A) >1 (-) 35 (-) >0.05
rs12714954 chr3:18303504 TBC1D5 All: C 7,520 8 A vs. G 0.217 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs9310545 chr3:18197007 TBC1D5 All: C 7,520 8 A vs. C 0.483 (C) 0.033 (A) >1 (-) 0 (-) >0.05
rs714141 chr3:18495300 SATB1 [+8220bp] All: C 7,520 8 C vs. T 0.342 (G) 0.467 (A) <1 (-) 0 (-) >0.05
rs9310563 chr3:18435217 TBC1D5 All: C 7,520 8 T vs. C 0.425 (T) 0.483 (T) >1 (-) 0 (-) >0.05
rs6577605 chr3:18002496 TBC1D5 All: C 7,520 8 T vs. C 0.142 (T) 0.0 (T) <1 (-) 48 (-) >0.05
rs7635386 chr3:18400202 TBC1D5 All: C 7,520 8 G vs. A 0.342 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs6779035 chr3:18249972 TBC1D5 All: C 7,520 8 T vs. C 0.4 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs4349529 chr3:17792117 TBC1D5 All: C 7,520 8 A vs. G 0.492 (A) 0.05 (A) <1 (-) 22 (-) >0.05
rs1463219 chr3:17301191 TBC1D5 All: C 7,520 8 C vs. T 0.025 (C) 0.183 (C) >1 (-) 33 (-) >0.05
rs6577628 chr3:18327345 TBC1D5 All: C 7,520 8 G vs. T 0.292 (G) 0.3 (T) >1 (-) 0 (-) >0.05
rs2733520 chr3:17246391 TBC1D5 All: C 7,520 8 T vs. C 0.467 (A) - <1 (-) 0 (-) >0.05
rs6550461 chr3:18468522 TBC1D5 All: C 7,520 8 G vs. A 0.167 (G) 0.217 (G) <1 (-) 15 (-) >0.05
rs13078644 chr3:17202333 TBC1D5 All: C 7,520 8 A vs. C 0.258 (A) 0.083 (A) <1 (-) 39 (-) >0.05
rs2167120 chr3:17262454 TBC1D5 All: C 7,520 8 T vs. C 0.183 (T) - <1 (-) 50 (-) >0.05
rs4908967 chr3:17774943 TBC1D5 All: C 7,520 8 C vs. A 0.475 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs9841532 chr3:18025442 TBC1D5 All: C 7,520 8 G vs. A 0.333 (G) 0.125 (A) >1 (-) 13 (-) >0.05
rs7646613 chr3:18082464 TBC1D5 All: C 7,520 8 T vs. G 0.492 (T) 0.008 (G) >1 (-) 0 (-) >0.05
rs1430895 chr3:17868678 TBC1D5 All: C 7,520 8 A vs. G 0.458 (T) 0.0 (C) >1 (-) 44 (-) >0.05
rs1463221 chr3:17221016 TBC1D5 All: C 7,520 8 C vs. T 0.467 (C) - <1 (-) 0 (-) >0.05
rs2596643 chr3:17294387 TBC1D5 All: C 7,520 8 G vs. A 0.467 (G) 0.167 (G) <1 (-) 0 (-) >0.05
rs1513755 chr3:18530978 SATB1 [+43898bp] All: C 7,520 8 G vs. A 0.067 (G) 0.317 (G) <1 (-) 0 (-) >0.05
rs958542 chr3:18247965 TBC1D5 All: C 7,520 8 C vs. T 0.442 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs283929 chr3:17359915 TBC1D5 All: C 7,520 8 T vs. C 0.475 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs4629317 chr3:17180930 TBC1D5 [-17724bp] All: C 7,520 8 A vs. G 0.175 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2060623 chr3:17338679 TBC1D5 All: C 7,520 8 T vs. C 0.475 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs1374197 chr3:17394614 TBC1D5 All: C 7,520 8 G vs. A 0.475 (G) 0.067 (G) <1 (-) 10 (-) >0.05
rs7645289 chr3:18072807 TBC1D5 All: C 7,520 8 G vs. A 0.2 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs2733499 chr3:17276333 TBC1D5 All: C 7,520 8 A vs. G 0.467 (T) - <1 (-) 0 (-) >0.05
rs7433389 chr3:18274112 TBC1D5 All: C 7,520 8 G vs. A 0.35 (G) 0.175 (A) >1 (-) 0 (-) >0.05
rs7427439 chr3:18318128 TBC1D5 All: C 7,520 8 A vs. G 0.225 (A) 0.033 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]