VAV3, chr1:108113782-108507766 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12564555 chr1:108085686 VAV3 [-28096bp] All: C 7,520 8 C vs. T 0.183 (C) 0.267 (C) 1.14 (1.04-1.24) 11 (0-71) 0.004
Meta_image?name=rs12564555

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12564555 chr1:108085686 VAV3 [-28096bp] All: C 7,520 8 C vs. T 0.183 (C) 0.267 (C) 1.14 (1.04-1.24) 11 (0-71) 0.004
rs542152 chr1:108076149 VAV3 [-37633bp] All: C 7,520 8 T vs. C 0.158 (T) 0.042 (T) 0.87 (0.78-0.96) 16 (0-59) 0.004
rs4503376 chr1:108268629 VAV3 All: C 7,520 8 C vs. T 0.267 (C) 0.283 (C) >1 (-) 0 (-) <0.05
rs10494074 chr1:108330009 VAV3 All: C 7,520 8 C vs. T 0.175 (C) 0.308 (C) >1 (-) 0 (-) >0.05
rs651844 chr1:108079072 VAV3 [-34710bp] All: C 7,520 8 G vs. A 0.258 (C) 0.342 (C) >1 (-) 5 (-) >0.05
rs1781050 chr1:108557704 VAV3 [+49938bp] All: C 7,520 8 C vs. T 0.2 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs4531312 chr1:108296507 VAV3 All: C 7,520 8 T vs. G 0.383 (T) 0.35 (T) <1 (-) 33 (-) >0.05
rs6674340 chr1:108273630 VAV3 All: C 7,520 8 G vs. A 0.142 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs10494071 chr1:108202878 VAV3 All: C 7,520 8 T vs. C 0.083 (T) 0.492 (T) >1 (-) 19 (-) >0.05
rs1350629 chr1:108527280 VAV3 [+19514bp] All: C 7,520 8 G vs. A 0.392 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs4503375 chr1:108250281 VAV3 All: C 7,520 8 G vs. A 0.125 (G) 0.475 (G) <1 (-) 0 (-) >0.05
rs4415601 chr1:108304877 VAV3 All: C 7,520 8 G vs. T 0.2 (G) 0.317 (T) <1 (-) 0 (-) >0.05
rs1777467 chr1:108554160 VAV3 [+46394bp] All: C 7,520 8 C vs. T 0.275 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs2494070 chr1:108247047 VAV3 All: C 7,520 8 G vs. A 0.458 (G) 0.317 (G) >1 (-) 49 (-) >0.05
rs4914959 chr1:108319078 VAV3 All: C 7,520 8 G vs. A 0.108 (G) 0.325 (G) <1 (-) 0 (-) >0.05
rs2504469 chr1:108218275 VAV3 All: C 7,520 8 T vs. C 0.317 (T) 0.25 (T) >1 (-) 52 (-) >0.05
rs10494085 chr1:108453966 VAV3 All: C 7,520 8 T vs. C 0.05 (T) 0.108 (T) >1 (-) 45 (-) >0.05
rs345271 chr1:108498144 VAV3 All: C 7,520 8 A vs. G 0.325 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs11808011 chr1:108300140 VAV3 All: C 7,520 8 C vs. T 0.4 (C) 0.375 (C) >1 (-) 14 (-) >0.05
rs8676 chr1:108113864 VAV3 All: C 7,520 8 C vs. T 0.275 (G) 0.467 (A) >1 (-) 0 (-) >0.05
rs10494083 chr1:108448201 VAV3 All: C 7,520 8 C vs. T 0.325 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs666003 chr1:108079944 VAV3 [-33838bp] All: C 7,520 8 T vs. C 0.492 (G) 0.325 (A) <1 (-) 0 (-) >0.05
rs7527291 chr1:108232389 VAV3 All: C 7,520 8 G vs. A 0.175 (G) - <1 (-) 0 (-) >0.05
rs1887630 chr1:108107669 VAV3 [-6113bp] All: C 7,520 8 C vs. T 0.092 (C) - >1 (-) 0 (-) >0.05
rs1444033 chr1:108073526 VAV3 [-40256bp] All: C 7,520 8 G vs. A 0.442 (C) 0.475 (T) >1 (-) 0 (-) >0.05
rs2494043 chr1:108265698 VAV3 All: C 7,520 8 C vs. T 0.042 (C) 0.008 (C) >1 (-) 0 (-) >0.05
rs345314 chr1:108462843 VAV3 All: C 7,520 8 G vs. A 0.233 (C) 0.0 (C) >1 (-) 0 (-) >0.05
rs345306 chr1:108467385 VAV3 All: C 7,520 8 C vs. A 0.483 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs2035015 chr1:108429933 VAV3 All: C 7,520 8 A vs. G 0.233 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs10494072 chr1:108218138 VAV3 All: C 7,520 8 C vs. T 0.108 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs11185141 chr1:108132878 VAV3 All: C 7,520 8 C vs. T 0.483 (T) 0.433 (C) <1 (-) 0 (-) >0.05
rs3761900 chr1:108509266 VAV3 [+1500bp] All: C 7,520 8 G vs. A 0.083 (C) 0.158 (C) >1 (-) 40 (-) >0.05
rs17020274 chr1:108430812 VAV3 All: C 7,520 8 C vs. T 0.058 (C) 0.033 (C) <1 (-) 0 (-) >0.05
rs2494059 chr1:108239957 VAV3 All: C 7,520 8 C vs. T 0.092 (C) 0.267 (C) <1 (-) 4 (-) >0.05
rs6583045 chr1:108286970 VAV3 All: C 7,520 8 A vs. G 0.492 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs1332684 chr1:108414229 VAV3 All: C 7,520 8 G vs. A 0.1 (C) 0.15 (C) >1 (-) 18 (-) >0.05
rs2494047 chr1:108212859 VAV3 All: C 7,520 8 T vs. C 0.483 (T) 0.25 (C) <1 (-) 28 (-) >0.05
rs1999487 chr1:108408982 VAV3 All: C 7,520 8 G vs. A 0.258 (C) 0.4 (C) <1 (-) 51 (-) >0.05
rs345290 chr1:108424743 VAV3 All: C 7,520 8 A vs. G 0.142 (T) 0.158 (T) >1 (-) 41 (-) >0.05
rs6583035 chr1:108186082 VAV3 All: C 7,520 8 C vs. T 0.25 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs10494080 chr1:108402074 VAV3 All: C 7,520 8 A vs. C 0.225 (A) 0.117 (A) <1 (-) 54 (-) >0.05
rs2335792 chr1:108122869 VAV3 All: C 7,520 8 C vs. T 0.167 (C) - >1 (-) 0 (-) >0.05
rs10881471 chr1:108095616 VAV3 [-18166bp] All: C 7,520 8 T vs. G 0.175 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs6692050 chr1:108069567 NTNG1 [+43487bp] All: C 7,520 8 A vs. G 0.342 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs345292 chr1:108425054 VAV3 All: C 7,520 8 G vs. A 0.292 (G) 0.35 (G) >1 (-) 0 (-) >0.05
rs17019810 chr1:108268800 VAV3 All: C 7,520 8 T vs. C 0.075 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs7519428 chr1:108281719 VAV3 All: C 7,520 8 A vs. G 0.1 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs4915076 chr1:108359504 VAV3 All: C 7,520 8 C vs. T 0.075 (C) 0.35 (C) >1 (-) 0 (-) >0.05
rs3747945 chr1:108536311 VAV3 [+28545bp] All: C 7,520 8 C vs. T 0.4 (G) 0.075 (G) >1 (-) 0 (-) >0.05
rs4915077 chr1:108366015 VAV3 All: C 7,520 8 C vs. T 0.075 (C) 0.35 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]